| Protein ZmZIM24 | |
|---|---|
|
ZmZIM24 is a protein in the ZIM family.
|
|
| Information | |
| TF Name: | ZmZIM24 |
| Species: | Maize |
| TF Family: | ZIM |
| Gene Name(Synonym): | ZIM24 |
| Uniprot ID: | C0HHL9 |
Protein ZmZIM24
ZmZIM24 is a protein in the ZIM family.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| PF06200 | PF09425 | |
| Zm00001eb019470_T001 |  | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d029448 | DAPseq |  |
sequence | fimo | position |
| Zm00001d029448 | DAPseq |  |
sequence | fimo | position |
| Zm00001d029448 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d029448 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmZIM24 is the regulator
Interactions where ZmZIM24 is the target
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Zm00001eb019470_T001 from maize genome v5
Amino Acid Sequence
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MAPAESGEKATSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKETMDLFPQIAGFGSEAATKEAP
DAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMASKGSPVAQNPGLLPPSTAATVTDSTKIAAVPAAPIAVANAQKSA
ADIPQAPKASLRRFLEKRKDRLTAKAPYPGSPSDVTPVKKEMSDGQPWLGLGPQIANPDLSLSKEASQ
MAPAESGEKATSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKETMDLFPQIAGFGSEAATKEAP
DAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMASKGSPVAQNPGLLPPSTAATVTDSTKIAAVPAAPIAVANAQKSA
ADIPQAPKASLRRFLEKRKDRLTAKAPYPGSPSDVTPVKKEMSDGQPWLGLGPQIANPDLSLSKEASQ
MAPAESGEKATSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKETMDLFPQIAGFGSEAATKEAP
DAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMASKGSPVAQNPGLLPPSTAATVTDSTKIAAVPAAPIAVANAQKSA
ADIPQAPKASLRRFLEKRKDRLTAKAPYPGSPSDVTPVKKEMSDGQPWLGLGPQIANPDLSLSKEASQ
MAPAESGEKATSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKETMDLFPQIAGFGSEAATKEAP
DAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMASKGSPVAQNPGLLPPSTAATVTDSTKIAAVPAAPIAVANAQKSA
ADIPQAPKASLRRFLEKRKDRLTAKAPYPGSPSDVTPVKKEMSDGQPWLGLGPQIANPDLSLSKEASQ
MAPAESGEKATSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKETMDLFPQIAGFGSEAATKEAP
DAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMASKGSPVAQNPGLLPPSTAATVTDSTKIAAVPAAPIAVANAQKSA
ADIPQAPKASLRRFLEKRKDRLTAKAPYPGSPSDVTPVKKEMSDGQPWLGLGPQIANPDLSLSKEASQ
MAPAESGEKATSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKETMDLFPQIAGFGSEAATKEAP
DAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMASKGSPVAQNPGLLPPSTAATVTDSTKIAAVPAAPIAVANAQKSA
ADIPQAPKASLRRFLEKRKDRLTAKAPYPGSPSDVTPVKKEMSDGQPWLGLGPQIANPDLSLSKEASQ
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF06200 |
|
| PF09425 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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ATGAATGGGAATAAAGATGAGCCCA...
ATGAATGGGAATAAAGATGAGCCCAGTGCCTCTTCATTTTTATGCACGCCCAGCACGCCCAGACGGCGGAGGAAGGGGGAAAGAGGAGGGCAGAGCAGCAACAGTACATCGAGCGAGGGAGTAGAGTAAATTGAATCAGGTTTCGTGTCGATTCGGAGGCTTTCGCTTCTGCTTGCGGAGTTGCGGTGGAGATTTGAGGCCTGCGGCGAAGATGGCACCTGCGGAATCCGGGGAGAAGGCGACCAGCTTCGCCATGGCCTGCAGCCTGCTCAGCCGCTACGTCAGGCAGAACGGTGCCGCCGCTGCCGATCTCGGCCTCGCTATCAGAGCTGAATCCGATGCAAAGAGGACGTCGACGGACATGGAAAAGGGGGAGACGGGGAAGGAGACCATGGATCTCTTCCCCCAGATCGCTGGATTCGGCTCGGAGGCCGCCACGAAGGAAGCCCCTGATGCGAGGGAGCCAGAGAAGCGCCAGCTGACTATCTTCTATGGCGGGAAGGTCCTTGTGTTCGATGACTTCCCTGCTGAGAAGGCAAAAGACCTGATGCAAATGGCCAGCAAGGGTTCACCCGTAGCCCAGAACCCTGGCCTGCTGCCTCCCTCCACAGCTGCAACCGTTACTGACAGCACCAAGATCGCAGCAGTGCCAGCCGCACCAATTGCTGTGGCCAACGCCCAGAAGAGTGCAGCAGATATACCGCAGGCTCCCAAGGCATCTCTTCGCAGGTTCCTTGAGAAGAGAAAGGATCGCCTTACTGCGAAAGCACCATACCCGGGTTCCCCTTCAGATGTTACACCTGTGAAGAAGGAGATGTCGGATGGTCAGCCATGGCTTGGGCTGGGACCTCAGATCGCCAACCCTGATCTGAGCTTGTCCAAGGAGGCGAGCCAGTGATCGATGATCCAGCATCACCATCTTCAAAACTGCGATACTCAACAGCCATGTGTGGAAGTGTTCTGTTTTGGGCCCCTATCATTCCGGGTTTTTTTTCGCATGGATAAATAGGTTGTACGAAAGTAAAGAACACAGCTAATGACGGACTTCAGTAAGGATTACCGGCGCTGGGGCAGGTTTGGCTGATCAGCCTTTGCTGGCCTGACCCAAGTGGCCATTTTAGAAAGATGAAAATGTAATGTAGTAGTTGCTAGAACAAGTTGGCATCTTGGGATGTTCTGTGTTGTTTGGCTTTGGCACTGGTGCGTGTCAGTGTCACAAAGCTATTTATTTTCACAGATACATGCTATATGATTTTTTTTATTATCTTCTGGTTGTCTCTGTAGGGTTATGAAATATCACAGCTTTTCTTTCTAAGTGATTGTGAT
GRMZM2G117513_T01 from maize genome v3
Amino Acid Sequence
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MAPAESGEKATSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKETMDLFPQIAGFGSEAATKEAP
DAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMASKGSPVAQNPGLLPPSTAATVTDSTKIAAVPAAPIAVANAQKSA
ADIPQAPKASLRRFLEKRKDRLTAKAPYPGSPSDVTPVKKEMSDGQPWLGLGPQIANPDLSLSKEASQ
Nucleotide Sequence
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GAGAAAGAATCCAACTCGCAATTTA...
GAGAAAGAATCCAACTCGCAATTTATGAATGGGAATAAAGATGAGCCCAGTGCCTCTTCATTTTTATGCACGCCCAGCACGCCCAGACGGCGGAGGAAGGGGGAAAGAGGAGGGCAGAGCAGCAACAGTACATCGAGCGAGGGAGTAGAGTAAATTGAATCAGGTTTCGTGTCGATTCGGAGGCTTTCGCTTCTGCTTGCGGAGTTGCGGTGGAGATTTGAGGCCTGCGGCGAAGATGGCACCTGCGGAATCCGGGGAGAAGGCGACCAGCTTCGCCATGGCCTGCAGCCTGCTCAGCCGCTACGTCAGGCAGAACGGTGCCGCCGCTGCCGATCTCGGCCTCGCTATCAGAGCTGAATCCGATGCAAAGAGGACGTCGACGGACATGGAAAAGGGGGAGACGGGGAAGGAGACCATGGATCTCTTCCCCCAGATCGCTGGATTCGGCTCGGAGGCCGCCACGAAGGAAGCCCCTGATGCGAGGGAGCCAGAGAAGCGCCAGCTGACTATCTTCTATGGCGGGAAGGTCCTTGTGTTCGATGACTTCCCTGCTGAGAAGGCAAAAGACCTGATGCAAATGGCCAGCAAGGGTTCACCCGTAGCCCAGAACCCTGGCCTGCTGCCTCCCTCCACAGCTGCAACCGTTACTGACAGCACCAAGATCGCAGCAGTGCCAGCCGCACCAATTGCTGTGGCCAACGCCCAGAAGAGTGCAGCAGATATACCGCAGGCTCCCAAGGCATCTCTTCGCAGGTTCCTTGAGAAGAGAAAGGATCGCCTTACTGCGAAAGCACCATACCCGGGTTCCCCTTCAGATGTTACACCTGTGAAGAAGGAGATGTCGGATGGTCAGCCATGGCTTGGGCTGGGACCTCAGATCGCCAACCCTGATCTGAGCTTGTCCAAGGAGGCGAGCCAGTGATCGATGATCCAGCATCACCATCTTCAAAACTGCGATACTCAACAGCCATGTGTGGAAGTGTTCTGTTTTGGGCCCCTATCATTCCGGGTTTTTTTTCGCATGGATAAATAGGTTGTACGAAAGTAAAGAACACAGCTAATGACGGACTTCAGTAAGGATTACCGGCGCTGGGGCAGGTTTGGCTGATCAGCCTTTGCTGGCCTGACCCAAGTGGCCATTTTAGAAAGATGAAAATGTAATGTAGTAGTTGCTAGAACAAGTTGGCATCTTGGGATGTTCTGTGTTGTTTGGCTTTGGCACTGGTGCGTGTCAGTGTCACAAAGCTATTTATTTTCACAGATACATGCTATATGATTTTTTTTATTATCTTCTGGTTGTCTCTGTAGGGTTATGAAATATCACAGCTTTTCTTTCTAAGTGATTGTGATCAATGCCCCTGGACTATCAGAATGTTGTTCTCTGAAGTTACAATCTAC
Zm00001d029448_T001 from maize genome v4
Amino Acid Sequence
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MAPAESGEKATSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKETMDLFPQIAGFGSEAATKEAP
DAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMASKGSPVAQNPGLLPPSTAATVTDSTKIAAVPAAPIAVANAQKSA
ADIPQAPKASLRRFLEKRKDRLTAKAPYPGSPSDVTPVKKEMSDGQPWLGLGPQIANPDLSLSKEASQ
Nucleotide Sequence
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ATGAATGGGAATAAAGATGAGCCCA...
ATGAATGGGAATAAAGATGAGCCCAGTGCCTCTTCATTTTTATGCACGCCCAGCACGCCCAGACGGCGGAGGAAGGGGGAAAGAGGAGGGCAGAGCAGCAACAGTACATCGAGCGAGGGAGTAGAGTAAATTGAATCAGGTTTCGTGTCGATTCGGAGGCTTTCGCTTCTGCTTGCGGAGTTGCGGTGGAGATTTGAGGCCTGCGGCGAAGATGGCACCTGCGGAATCCGGGGAGAAGGCGACCAGCTTCGCCATGGCCTGCAGCCTGCTCAGCCGCTACGTCAGGCAGAACGGTGCCGCCGCTGCCGATCTCGGCCTCGCTATCAGAGCTGAATCCGATGCAAAGAGGACGTCGACGGACATGGAAAAGGGGGAGACGGGGAAGGAGACCATGGATCTCTTCCCCCAGATCGCTGGATTCGGCTCGGAGGCCGCCACGAAGGAAGCCCCTGATGCGAGGGAGCCAGAGAAGCGCCAGCTGACTATCTTCTATGGCGGGAAGGTCCTTGTGTTCGATGACTTCCCTGCTGAGAAGGCAAAAGACCTGATGCAAATGGCCAGCAAGGGTTCACCCGTAGCCCAGAACCCTGGCCTGCTGCCTCCCTCCACAGCTGCAACCGTTACTGACAGCACCAAGATCGCAGCAGTGCCAGCCGCACCAATTGCTGTGGCCAACGCCCAGAAGAGTGCAGCAGATATACCGCAGGCTCCCAAGGCATCTCTTCGCAGGTTCCTTGAGAAGAGAAAGGATCGCCTTACTGCGAAAGCACCATACCCGGGTTCCCCTTCAGATGTTACACCTGTGAAGAAGGAGATGTCGGATGGTCAGCCATGGCTTGGGCTGGGACCTCAGATCGCCAACCCTGATCTGAGCTTGTCCAAGGAGGCGAGCCAGTGATCGATGATCCAGCATCACCATCTTCAAAACTGCGATACTCAACAGCCATGTGTGGAAGTGTTCTGTTTTGGGCCCCTATCATTCCGGGTTTTTTTTCGCATGGATAAATAGGTTGTACGAAAGTAAAGAACACAGCTAATGACGGACTTCAGTAAGGATTACCGGCGCTGGGGCAGGTTTGGCTGATCAGCCTTTGCTGGCCTGACCCAAGTGGCCATTTTAGAAAGATGAAAATGTAATGTAGTAGTTGCTAGAACAAGTTGGCATCTTGGGATGTTCTGTGTTGTTTGGCTTTGGCACTGGTGCGTGTCAGTGTCACAAAGCTATTTATTTTCACAGATACATGCTATATGATTTTTTTTATTATCTTCTGGTTGTCTCTGTAGGGTTATGAAATATCACAGCTTTTCTTTCTAAGTGATTGTGATCAATGCCCCTGGACTATCAGAATGTTGTTCTCTGAAGTTACAATCTACTACTCCCGTTGATCTAGTAAATTATAAGAAGTTTTGTGTTTTC
Zm00001d029448_T002 from maize genome v4
Amino Acid Sequence
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MAPAESGEKATSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKVLVFDDFPAEKAKDLMQMASKG
SPVAQNPGLLPPSTAATVTDSTKIAAVPAAPIAVANAQKSAADIPQAPKASLRRFLEKRKDRLTAKAPYPGSPSDVTPVK
KEMSDGQPWLGLGPQIANPDLSLSKEASQ
Nucleotide Sequence
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GGAGGAAGGGGGAAAGAGGAGGGCA...
GGAGGAAGGGGGAAAGAGGAGGGCAGAGCAGCAACAGTACATCGAGCGAGGGAGTAGAGTAAATTGAATCAGGTTTCGTGTCGATTCGGAGGCTTTCGCTTCTGCTTGCGGAGTTGCGGTGGAGATTTGAGGCCTGCGGCGAAGATGGCACCTGCGGAATCCGGGGAGAAGGCGACCAGCTTCGCCATGGCCTGCAGCCTGCTCAGCCGCTACGTCAGGCAGAACGGTGCCGCCGCTGCCGATCTCGGCCTCGCTATCAGAGCTGAATCCGATGCAAAGAGGACGTCGACGGACATGGAAAAGGGGGAGACGGGGAAGGTCCTTGTGTTCGATGACTTCCCTGCTGAGAAGGCAAAAGACCTGATGCAAATGGCCAGCAAGGGTTCACCCGTAGCCCAGAACCCTGGCCTGCTGCCTCCCTCCACAGCTGCAACCGTTACTGACAGCACCAAGATCGCAGCAGTGCCAGCCGCACCAATTGCTGTGGCCAACGCCCAGAAGAGTGCAGCAGATATACCGCAGGCTCCCAAGGCATCTCTTCGCAGGTTCCTTGAGAAGAGAAAGGATCGCCTTACTGCGAAAGCACCATACCCGGGTTCCCCTTCAGATGTTACACCTGTGAAGAAGGAGATGTCGGATGGTCAGCCATGGCTTGGGCTGGGACCTCAGATCGCCAACCCTGATCTGAGCTTGTCCAAGGAGGCGAGCCAGTGATCGATGATCCAGCATCACCATCTTCAAAACTGCGATACTCAACAGCCATGTGTGGAAGTGTTCTGTTTTGGGCCCCTATCATTCCGGGTTTTTTTTCGCATGGATAAATAGGTTGTACGAAAGTAAAGAACACAGCTAATGACGGACTTCAGTAAGGATTACCGGCGCTGGGGCAGGTTTGGCTGATCAGCCTTTGCTGGCCTGACCCAAGTGGCCATTTTAGAAAGATGAAAATGTAATGTAGTAGTTGCTAGAACAAGTTGGCATCTTGGGATGTTCTGTGTTGTTTGGCTTTGGCACTGGTGCGTGTCAGTGTCACAAAGCTATTTATTTTCACAGATACATGCTATATGATTTTTTT
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